PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D07G1078
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 469aa    MW: 52333.1 Da    PI: 7.662
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D07G1078genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.6e-10165206445
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                   k  rr+++NReAA++sR+RKka++++Le    +L++  ++L
  Gh_D07G1078 165 AKTLRRLAQNREAAKKSRLRKKAYVQQLESSRIKLTQLEQEL 206
                  6889*************************8766666655544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-4162220IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.151164208IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7165206IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.83E-6166209No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-7167210No hitNo description
PROSITE patternPS000360169184IPR004827Basic-leucine zipper domain
PfamPF141441.5E-29247322IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MANHHIPYAL LHGMNVPTSF INQEGSAFDF GELEEAIVLQ GAKANLLTGR TAATLEMFPS  60
WPMRYQQTPG SSKSGGESTD SGSALNTISS KTENQFEPDS PISKKASSSY HQAFDQQNLQ  120
LQQQQQQEMA SDPSRTGTSL NQSAPIVKPL QEKKRASTSE KQLDAKTLRR LAQNREAAKK  180
SRLRKKAYVQ QLESSRIKLT QLEQELQRAR SQGLLLGSSG GGVGNISSGA VICDMEYARW  240
LEDDERHMSE LRTGLHSNLS DTDLRLMVNT YLSHYDENFR LKGMAAKFDV FHLLTGMWTS  300
PAERCFLWMG GFRPSELIKI LISQLDPLTE QQLMGICSLQ HSSQQAEEAL SQGLEQLQQS  360
LIDTVAGGPA IDGMQQMAIA LSKLANLEGF VRQADNLRQQ TLHQLPRILT VRQAARCFLV  420
IGEYYGRLRA LSSLWASRPR GRLMSDEQPC QTTTELQMVQ PSQSHFSHF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012476845.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
SwissprotO241601e-128TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D2N8M60.0A0A0D2N8M6_G
STRINGPOPTR_0009s16590.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM55242441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein